Pseudonocardia dioxanivorans CB1190

Gram-positiverodAerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Pseudonocardia dioxanivorans CB1190 is a Gram-positive bacterium characterized by its rod shape and non-motility. This species is aerobic, thriving in environments with sufficient oxygen. Its optimal growth temperature is 30°C, and it falls within the mesophilic temperature range. Notably, P. dioxanivorans is free-living and has been identified in fresh water sludge habitats. This bacterium possesses two replicons, which may contribute to its genetic diversity and adaptability. Pseudonocardia dioxanivorans is known to interact with a variety of hosts, including Homo sapiens, members of the Viridiplantae, Insecta, and multiple species within the Formicidae family, such as Acromyrmex and Trachymyrmex. This wide host range indicates a potential ecological versatility, allowing it to thrive in various environments. However, it is important to note that Pseudonocardia dioxanivorans has been associated with infections in its hosts, which may raise concerns regarding its pathogenic potential. Given its presence in diverse ecosystems and its free-living nature, P. dioxanivorans could play a role in nutrient cycling and organic matter decomposition in freshwater habitats, influencing both microbial community dynamics and the health of associated organisms. The duality of its ecological role and potential for infection underscores the need for further research into its interactions within microbial and host communities. Accessions for this species include NC_015312.1 and NC_015313.1.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia dioxanivorans
StrainCB1190

Profile

Physiology
Gram staining propertiesPositive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature30
Temperature rangeMesophilic
HabitatFresh water - Sludge
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Insecta
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudonocardia dioxanivorans CB1190, complete sequence.

Gene Summary

Adenine Count

947176 bp

Thymine Count

946932 bp

Guanine Count

2599069 bp

Cytosine Count

2603394 bp

Genome Length

7096571 bp

Protein-coding Genes

6674 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pup--protein ligasePSED_RS16575Not AvailableNegative3513990 - 351535151405.0
bifunctional phosphatase pap2/diacylglycerol kinase family proteinPSED_RS16580Not AvailablePositive3515394 - 351697457196.6
hypothetical proteinPSED_RS16585Not AvailableNegative3516986 - 351811040703.1
2fe-2s iron-sulfur cluster-binding proteinPSED_RS16590Not AvailableNegative3518184 - 351913434239.4
nad(p)h-dependent oxidoreductase subunit ePSED_RS16595Not AvailableNegative3519131 - 352101166173.7
formate dehydrogenase h subunit alpha, selenocysteine-containingPSED_RS16600Not AvailableNegative3521024 - 352295570160.4
molybdenum cofactor guanylyltransferasePSED_RS16605Not AvailableNegative3523012 - 352390830480.8
formate dehydrogenase accessory sulfurtransferase fdhdPSED_RS16610Not AvailablePositive3524149 - 352497629238.2
voc family proteinPSED_RS16615Not AvailablePositive3524973 - 352534413523.1
voc family proteinPSED_RS16620Not AvailableNegative3525493 - 352586113022.1

Displaying genes 3371 – 3380 of 6763 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039992Bacillus firmus DS1Not available24218-00-6Not available

Displaying 1–3 of 3 metabolites

Health Effects

Health ConditionRelationReference
InfectionsCausesPMC12139244

Displaying health effects 1 – 1 of 1 in total