Pseudonocardia dioxanivorans CB1190

Gram-positiverodAerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Pseudonocardia dioxanivorans CB1190 is a Gram-positive bacterium characterized by its rod shape and non-motility. This species is aerobic, thriving in environments with sufficient oxygen. Its optimal growth temperature is 30°C, and it falls within the mesophilic temperature range. Notably, P. dioxanivorans is free-living and has been identified in fresh water sludge habitats. This bacterium possesses two replicons, which may contribute to its genetic diversity and adaptability. Pseudonocardia dioxanivorans is known to interact with a variety of hosts, including Homo sapiens, members of the Viridiplantae, Insecta, and multiple species within the Formicidae family, such as Acromyrmex and Trachymyrmex. This wide host range indicates a potential ecological versatility, allowing it to thrive in various environments. However, it is important to note that Pseudonocardia dioxanivorans has been associated with infections in its hosts, which may raise concerns regarding its pathogenic potential. Given its presence in diverse ecosystems and its free-living nature, P. dioxanivorans could play a role in nutrient cycling and organic matter decomposition in freshwater habitats, influencing both microbial community dynamics and the health of associated organisms. The duality of its ecological role and potential for infection underscores the need for further research into its interactions within microbial and host communities. Accessions for this species include NC_015312.1 and NC_015313.1.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia dioxanivorans
StrainCB1190

Profile

Physiology
Gram staining propertiesPositive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature30
Temperature rangeMesophilic
HabitatFresh water - Sludge
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Insecta
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudonocardia dioxanivorans CB1190, complete sequence.

Gene Summary

Adenine Count

947176 bp

Thymine Count

946932 bp

Guanine Count

2599069 bp

Cytosine Count

2603394 bp

Genome Length

7096571 bp

Protein-coding Genes

6674 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gamma carbonic anhydrase family proteinPSED_RS11655Not AvailableNegative2454796 - 245555426621.8
trimeric intracellular cation channel family proteinPSED_RS11660Not AvailablePositive2455842 - 245650422185.4
hypothetical proteinPSED_RS11665Not AvailableNegative2456549 - 245706417917.5
nadp-specific glutamate dehydrogenasePSED_RS11670Not AvailableNegative2457278 - 245863048651.8
marr family winged helix-turn-helix transcriptional regulatorPSED_RS11675Not AvailableNegative2458766 - 245928418315.7
hypothetical proteinPSED_RS11680Not AvailableNegative2459495 - 246024427850.2
grea/greb family elongation factorPSED_RS11685Not AvailableNegative2460307 - 246081618947.0
marr family winged helix-turn-helix transcriptional regulatorPSED_RS11690Not AvailableNegative2461332 - 246178417071.4
spoiie family protein phosphatasePSED_RS11695Not AvailableNegative2461884 - 246357260167.4
stas domain-containing proteinPSED_RS11705Not AvailablePositive2464307 - 246467513354.1

Displaying genes 2381 – 2390 of 6763 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039992Bacillus firmus DS1Not available24218-00-6Not available

Displaying 1–3 of 3 metabolites

Health Effects

Health ConditionRelationReference
InfectionsCausesPMC12139244

Displaying health effects 1 – 1 of 1 in total