Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Odoribacteraceae
Genus
Odoribacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Odoribacteraceae |
| Genus | Odoribacter |
| Species | Odoribacter splanchnicus |
| Strain | DSM 20712 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1244368 bp
Thymine Count
1243488 bp
Guanine Count
940616 bp
Cytosine Count
963816 bp
Genome Length
4392288 bp
Protein-coding Genes
3633 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pkd-like family lipoprotein | ODOSP_RS18195 | Not Available | Negative | 4291106 - 4292674 | 61004.4 |
| duf4843 domain-containing protein | ODOSP_RS18200 | Not Available | Negative | 4292707 - 4293450 | 28880.4 |
| ragb/susd family nutrient uptake outer membrane protein | ODOSP_RS18205 | Not Available | Negative | 4293480 - 4294904 | 55282.9 |
| susc/raga family tonb-linked outer membrane protein | ODOSP_RS18210 | Not Available | Negative | 4294933 - 4298199 | 122392.0 |
| fecr family protein | ODOSP_RS18215 | Not Available | Negative | 4298357 - 4299499 | 43865.4 |
| phage integrase sam-like domain-containing protein | ODOSP_RS18220 | Q45620 | Positive | 4299671 - 4300822 | 44165.6 |
| rna polymerase sigma-70 factor | ODOSP_RS18225 | Not Available | Negative | 4300988 - 4301557 | 22296.0 |
| transposase | ODOSP_RS20350 | Not Available | Negative | 4301976 - 4302431 | 17424.9 |
| is1634 family transposase | ODOSP_RS18235 | Not Available | Positive | 4302522 - 4304084 | 59246.6 |
| helix-turn-helix domain-containing protein | ODOSP_RS18240 | Not Available | Negative | 4304441 - 4304896 | 17168.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
