Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Odoribacteraceae
Genus
Odoribacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Odoribacteraceae |
| Genus | Odoribacter |
| Species | Odoribacter splanchnicus |
| Strain | DSM 20712 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1244368 bp
Thymine Count
1243488 bp
Guanine Count
940616 bp
Cytosine Count
963816 bp
Genome Length
4392288 bp
Protein-coding Genes
3633 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (2fe-2s) ferredoxin domain-containing protein | ODOSP_RS16495 | Not Available | Negative | 3897920 - 3898162 | 9157.14 |
| protein translocase subunit secdf | ODOSP_RS16500 | D0MIN4 | Negative | 3898312 - 3901314 | 109606.0 |
| retropepsin-like aspartic protease | ODOSP_RS16505 | Not Available | Negative | 3901433 - 3901918 | 18408.4 |
| malate dehydrogenase | ODOSP_RS16510 | Q11QQ3 | Negative | 3902008 - 3902943 | 33223.7 |
| pyridoxal phosphate-dependent aminotransferase | ODOSP_RS16515 | Q795M6 | Positive | 3903252 - 3904454 | 45041.4 |
| mate family efflux transporter | ODOSP_RS16520 | Not Available | Positive | 3904575 - 3905912 | 47997.9 |
| hypothetical protein | ODOSP_RS16525 | Not Available | Positive | 3906014 - 3906505 | 19174.5 |
| d-alanine--d-alanine ligase | ODOSP_RS16535 | Q64Z37 | Positive | 3907350 - 3908330 | 36404.2 |
| trna 2-thiouridine(34) synthase mnma | ODOSP_RS16540 | B3ETH8 | Negative | 3908348 - 3909442 | 41169.3 |
| trna (guanosine(46)-n7)-methyltransferase trmb | ODOSP_RS16545 | Q7MVS9 | Negative | 3909445 - 3910221 | 30019.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
