Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Odoribacteraceae
Genus
Odoribacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Odoribacteraceae |
| Genus | Odoribacter |
| Species | Odoribacter splanchnicus |
| Strain | DSM 20712 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1244368 bp
Thymine Count
1243488 bp
Guanine Count
940616 bp
Cytosine Count
963816 bp
Genome Length
4392288 bp
Protein-coding Genes
3633 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3098 domain-containing protein | ODOSP_RS16195 | Not Available | Positive | 3831477 - 3831761 | 10567.3 |
| undecaprenyl-diphosphate phosphatase | ODOSP_RS16200 | A6KZJ8 | Positive | 3831787 - 3832575 | 28361.6 |
| trna pseudouridine(55) synthase trub | ODOSP_RS16205 | A6KZJ9 | Positive | 3832647 - 3833354 | 26414.0 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | ODOSP_RS16210 | A6KZK0 | Positive | 3833478 - 3834527 | 40203.4 |
| m48 family metallopeptidase | ODOSP_RS16215 | Q9P7G4 | Positive | 3834657 - 3835454 | 29345.8 |
| pyridoxal phosphate-dependent aminotransferase family protein | ODOSP_RS16220 | A7HMM1 | Negative | 3835555 - 3836805 | 46221.1 |
| outer membrane protein assembly factor bamd | ODOSP_RS16225 | Not Available | Positive | 3837083 - 3837883 | 32008.1 |
| dna-directed rna polymerase subunit omega | ODOSP_RS16230 | Not Available | Positive | 3837913 - 3838266 | 13570.2 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | ODOSP_RS16235 | A0A2I9 | Positive | 3838394 - 3839590 | 43787.3 |
| aspartate carbamoyltransferase | ODOSP_RS16240 | Q8A9S3 | Positive | 3839837 - 3840745 | 34163.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
