Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Odoribacteraceae
Genus
Odoribacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Odoribacteraceae |
| Genus | Odoribacter |
| Species | Odoribacter splanchnicus |
| Strain | DSM 20712 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Odoribacter splanchnicus DSM 20712
Accession NumberNC_015160.1
Gene Summary
Adenine Count
1244368 bp
Thymine Count
1243488 bp
Guanine Count
940616 bp
Cytosine Count
963816 bp
Genome Length
4392288 bp
Protein-coding Genes
3633 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | + | 382962 - 383046 | Not Available |
| na+/h+ antiporter nhaa | ODOSP_RS01575 | Q5LC87 | - | 383191 - 384537 | 48905.1 |
| nad-dependent epimerase/dehydratase family protein | ODOSP_RS01580 | P39858 | - | 384527 - 385552 | 38383.0 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | ODOSP_RS01585 | P54462 | - | 385851 - 387137 | 48710.8 |
| lipid-a-disaccharide synthase | ODOSP_RS01590 | Q39T49 | + | 387260 - 388396 | 43218.7 |
| pcmd domain-containing protein | ODOSP_RS01595 | Not Available | - | 388444 - 389394 | 35629.5 |
| tolc family protein | ODOSP_RS01600 | Not Available | + | 389603 - 390919 | 48830.4 |
| efflux rnd transporter periplasmic adaptor subunit | ODOSP_RS01605 | Not Available | + | 390970 - 392178 | 43843.4 |
| abc transporter atp-binding protein | ODOSP_RS01610 | Q9WYI7 | + | 392400 - 393140 | 27337.7 |
| abc transporter permease | ODOSP_RS01615 | A0LM36 | + | 393156 - 394376 | 44416.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.