Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Odoribacteraceae
Genus
Odoribacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Odoribacteraceae |
| Genus | Odoribacter |
| Species | Odoribacter splanchnicus |
| Strain | DSM 20712 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1244368 bp
Thymine Count
1243488 bp
Guanine Count
940616 bp
Cytosine Count
963816 bp
Genome Length
4392288 bp
Protein-coding Genes
3633 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | ODOSP_RS13595 | A6LHB0 | Positive | 3219041 - 3219748 | 25831.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | ODOSP_RS13600 | Q11NY7 | Positive | 3219822 - 3221717 | 69715.9 |
| crp/fnr family transcriptional regulator | ODOSP_RS13605 | Q79VI7 | Positive | 3221714 - 3222433 | 27140.9 |
| pyridoxal phosphate-dependent aminotransferase | ODOSP_RS13610 | C6C2Z3 | Positive | 3222489 - 3223688 | 44652.5 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | ODOSP_RS13615 | Not Available | Positive | 3223802 - 3224932 | 43157.6 |
| hypothetical protein | ODOSP_RS13620 | Not Available | Positive | 3225205 - 3225498 | 11168.1 |
| glutamate--trna ligase | ODOSP_RS13625 | A6L0E8 | Positive | 3225476 - 3226996 | 58200.1 |
| duf4870 domain-containing protein | ODOSP_RS13630 | Not Available | Positive | 3227006 - 3227341 | 12137.4 |
| hypothetical protein | ODOSP_RS13635 | Not Available | Positive | 3227506 - 3228693 | 45231.9 |
| trna dihydrouridine synthase dusb | ODOSP_RS13640 | Q9HUW1 | Negative | 3228680 - 3229681 | 38087.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
