Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Odoribacteraceae
Genus
Odoribacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Odoribacteraceae |
| Genus | Odoribacter |
| Species | Odoribacter splanchnicus |
| Strain | DSM 20712 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1244368 bp
Thymine Count
1243488 bp
Guanine Count
940616 bp
Cytosine Count
963816 bp
Genome Length
4392288 bp
Protein-coding Genes
3633 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biosynthetic arginine decarboxylase | ODOSP_RS12985 | A6L012 | Negative | 3093892 - 3095781 | 71180.9 |
| murein l,d-transpeptidase catalytic domain family protein | ODOSP_RS12990 | Not Available | Negative | 3096159 - 3096797 | 23240.2 |
| l,d-transpeptidase | ODOSP_RS12995 | Not Available | Negative | 3096808 - 3097719 | 34548.9 |
| hypothetical protein | ODOSP_RS13000 | Not Available | Negative | 3097940 - 3098431 | 19835.0 |
| duf3800 domain-containing protein | ODOSP_RS13005 | Not Available | Negative | 3098433 - 3099113 | 27438.3 |
| hypothetical protein | ODOSP_RS13010 | Not Available | Negative | 3099725 - 3100132 | 15264.4 |
| hypothetical protein | ODOSP_RS13015 | Not Available | Negative | 3100385 - 3101401 | 38955.2 |
| helix-turn-helix transcriptional regulator | ODOSP_RS13020 | Not Available | Negative | 3101404 - 3101763 | 13764.6 |
| hypothetical protein | ODOSP_RS19955 | Not Available | Positive | 3101878 - 3102051 | 6674.32 |
| response regulator transcription factor | ODOSP_RS13025 | Not Available | Positive | 3102114 - 3102680 | 20714.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
