Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Odoribacteraceae
Genus
Odoribacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Odoribacteraceae |
| Genus | Odoribacter |
| Species | Odoribacter splanchnicus |
| Strain | DSM 20712 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1244368 bp
Thymine Count
1243488 bp
Guanine Count
940616 bp
Cytosine Count
963816 bp
Genome Length
4392288 bp
Protein-coding Genes
3633 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-canonical purine ntp diphosphatase | ODOSP_RS12675 | A6LGA4 | Positive | 3021859 - 3022443 | 21946.0 |
| dna repair protein reco | ODOSP_RS12680 | A6GWB0 | Positive | 3022454 - 3023167 | 27642.7 |
| abc transporter atp-binding protein | ODOSP_RS12685 | Not Available | Positive | 3023428 - 3024354 | 34939.6 |
| xanthan lyase xalb precursor | ODOSP_RS12690 | Not Available | Positive | 3024375 - 3027695 | 126852.0 |
| tolc family protein | ODOSP_RS12695 | Not Available | Positive | 3027726 - 3029189 | 55989.4 |
| efflux rnd transporter periplasmic adaptor subunit | ODOSP_RS12700 | P25196 | Positive | 3029232 - 3030290 | 39504.5 |
| efflux rnd transporter permease subunit | ODOSP_RS12705 | P25197 | Positive | 3030353 - 3033442 | 112361.0 |
| efflux rnd transporter permease subunit | ODOSP_RS12710 | Not Available | Positive | 3033489 - 3038234 | 177054.0 |
| hypothetical protein | ODOSP_RS12715 | Not Available | Positive | 3038247 - 3038948 | 26659.8 |
| hypothetical protein | ODOSP_RS19950 | Not Available | Negative | 3038915 - 3039073 | 6166.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
