Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Odoribacteraceae
Genus
Odoribacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Odoribacteraceae |
| Genus | Odoribacter |
| Species | Odoribacter splanchnicus |
| Strain | DSM 20712 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1244368 bp
Thymine Count
1243488 bp
Guanine Count
940616 bp
Cytosine Count
963816 bp
Genome Length
4392288 bp
Protein-coding Genes
3633 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ODOSP_RS19945 | Not Available | Positive | 2988164 - 2988304 | 5057.01 |
| ragb/susd family nutrient uptake outer membrane protein | ODOSP_RS12535 | Not Available | Negative | 2988418 - 2989827 | 50941.2 |
| tonb-dependent receptor | ODOSP_RS12540 | Not Available | Negative | 2989854 - 2992913 | 112551.0 |
| transposase | ODOSP_RS12545 | Not Available | Negative | 2993435 - 2993821 | 15126.2 |
| 3'-5' exonuclease | ODOSP_RS12550 | P13267 | Negative | 2993874 - 2994365 | 18666.9 |
| virulence protein rhum/fic/doc family protein | ODOSP_RS12555 | Not Available | Negative | 2994376 - 2995386 | 38346.4 |
| glycosyltransferase | ODOSP_RS12560 | D4GYG7 | Negative | 2995534 - 2996574 | 39519.6 |
| glycosyltransferase | ODOSP_RS12565 | Not Available | Positive | 2996754 - 2997944 | 45319.6 |
| udp-n-acetyl-d-mannosamine dehydrogenase | ODOSP_RS12570 | P67066 | Positive | 2997988 - 2999196 | 44806.9 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | ODOSP_RS12575 | P58600 | Positive | 2999202 - 3000368 | 44042.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
