Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Odoribacteraceae
Genus
Odoribacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Odoribacteraceae |
| Genus | Odoribacter |
| Species | Odoribacter splanchnicus |
| Strain | DSM 20712 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1244368 bp
Thymine Count
1243488 bp
Guanine Count
940616 bp
Cytosine Count
963816 bp
Genome Length
4392288 bp
Protein-coding Genes
3633 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | ODOSP_RS11835 | Not Available | Negative | 2803210 - 2804346 | 43325.9 |
| rna polymerase sigma factor | ODOSP_RS11840 | Not Available | Negative | 2804400 - 2804978 | 22659.3 |
| rna polymerase sigma-70 factor | ODOSP_RS18855 | Not Available | Negative | 2805163 - 2806011 | 33496.9 |
| duf4465 domain-containing protein | ODOSP_RS18860 | Not Available | Negative | 2806371 - 2807207 | 31109.6 |
| ragb/susd family nutrient uptake outer membrane protein | ODOSP_RS11855 | Not Available | Negative | 2807242 - 2807541 | 11395.5 |
| ragb/susd family nutrient uptake outer membrane protein | ODOSP_RS11860 | Not Available | Negative | 2807543 - 2808709 | 44512.5 |
| tonb-dependent receptor | ODOSP_RS11865 | Not Available | Negative | 2808717 - 2812181 | 128685.0 |
| fecr family protein | ODOSP_RS11870 | Not Available | Negative | 2812265 - 2813437 | 45654.7 |
| thioredoxin family protein | ODOSP_RS18865 | Not Available | Negative | 2814178 - 2816286 | 79747.4 |
| sigma-54-dependent fis family transcriptional regulator | ODOSP_RS11885 | P0AFU4 | Positive | 2816626 - 2817867 | 46888.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
