Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Odoribacteraceae
Genus
Odoribacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Odoribacteraceae |
| Genus | Odoribacter |
| Species | Odoribacter splanchnicus |
| Strain | DSM 20712 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1244368 bp
Thymine Count
1243488 bp
Guanine Count
940616 bp
Cytosine Count
963816 bp
Genome Length
4392288 bp
Protein-coding Genes
3633 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin family protein | ODOSP_RS11090 | Not Available | Positive | 2630384 - 2631850 | 57069.9 |
| bacon domain-containing protein | ODOSP_RS11095 | Not Available | Positive | 2631858 - 2633528 | 62540.4 |
| rna polymerase sigma factor | ODOSP_RS11100 | Not Available | Negative | 2633589 - 2634158 | 22593.3 |
| methionine adenosyltransferase | ODOSP_RS11105 | A6KZL1 | Negative | 2634322 - 2635629 | 48254.8 |
| 3-deoxy-d-manno-octulosonic acid transferase | ODOSP_RS11110 | Q3KMF4 | Positive | 2635922 - 2637154 | 45991.9 |
| s-methyl-5-thioribose-1-phosphate isomerase | ODOSP_RS11115 | A6LE92 | Negative | 2637144 - 2638202 | 38527.6 |
| s28 family serine protease | ODOSP_RS11120 | P83615 | Negative | 2638199 - 2639530 | 51814.7 |
| hypothetical protein | ODOSP_RS11125 | Not Available | Positive | 2639762 - 2640073 | 11313.1 |
| mate family efflux transporter | ODOSP_RS11130 | Q7N1G0 | Positive | 2640051 - 2641409 | 50346.1 |
| had family phosphatase | ODOSP_RS11135 | Not Available | Negative | 2641381 - 2641983 | 23834.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
