Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Odoribacteraceae
Genus
Odoribacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Odoribacteraceae |
| Genus | Odoribacter |
| Species | Odoribacter splanchnicus |
| Strain | DSM 20712 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1244368 bp
Thymine Count
1243488 bp
Guanine Count
940616 bp
Cytosine Count
963816 bp
Genome Length
4392288 bp
Protein-coding Genes
3633 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate carboxykinase (atp) | ODOSP_RS09475 | A6LFQ4 | Positive | 2268201 - 2269808 | 59160.2 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | ODOSP_RS09480 | Q2LVL6 | Negative | 2270227 - 2271006 | 28318.5 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | ODOSP_RS09485 | Q8A015 | Negative | 2271068 - 2272471 | 52304.7 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | ODOSP_RS09490 | A6LDS1 | Negative | 2272471 - 2273505 | 36724.3 |
| ribosome assembly cofactor rimp | ODOSP_RS09495 | Q5LIN3 | Positive | 2273936 - 2274397 | 17702.4 |
| transcription termination factor nusa | ODOSP_RS09500 | P48514 | Positive | 2274453 - 2275691 | 47514.6 |
| translation initiation factor if-2 | ODOSP_RS09505 | A6LHS1 | Positive | 2275727 - 2278567 | 105240.0 |
| protein-disulfide reductase dsbd domain-containing protein | ODOSP_RS09510 | Not Available | Positive | 2278728 - 2279189 | 16860.3 |
| capa family protein | ODOSP_RS09515 | P96738 | Positive | 2279278 - 2280375 | 41841.7 |
| methylglyoxal synthase | ODOSP_RS09520 | Q3AEV6 | Positive | 2280479 - 2280859 | 13734.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
