Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Odoribacteraceae
Genus
Odoribacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Odoribacteraceae |
| Genus | Odoribacter |
| Species | Odoribacter splanchnicus |
| Strain | DSM 20712 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1244368 bp
Thymine Count
1243488 bp
Guanine Count
940616 bp
Cytosine Count
963816 bp
Genome Length
4392288 bp
Protein-coding Genes
3633 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | ODOSP_RS08160 | Q57124 | Negative | 1941420 - 1944473 | 112791.0 |
| efflux rnd transporter periplasmic adaptor subunit | ODOSP_RS08165 | Not Available | Negative | 1944745 - 1945815 | 39488.3 |
| magnesium transporter cora family protein | ODOSP_RS08170 | Not Available | Negative | 1946126 - 1947052 | 36208.2 |
| endonuclease | ODOSP_RS08175 | Not Available | Negative | 1947175 - 1948179 | 38028.6 |
| carboxymuconolactone decarboxylase family protein | ODOSP_RS08180 | Not Available | Negative | 1948397 - 1948768 | 14134.1 |
| rip metalloprotease rsep | ODOSP_RS08185 | Q9WZZ2 | Negative | 1948768 - 1950114 | 50563.9 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | ODOSP_RS08190 | Q5L9P6 | Negative | 1950167 - 1951333 | 42609.6 |
| peptidoglycan dd-metalloendopeptidase family protein | ODOSP_RS08195 | Not Available | Negative | 1951387 - 1952247 | 33047.6 |
| mechanosensitive ion channel family protein | ODOSP_RS08200 | Not Available | Negative | 1952840 - 1954069 | 47046.9 |
| pitrilysin family protein | ODOSP_RS08205 | P31828 | Positive | 1954219 - 1957029 | 106723.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
