Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Odoribacteraceae
Genus
Odoribacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Odoribacteraceae |
| Genus | Odoribacter |
| Species | Odoribacter splanchnicus |
| Strain | DSM 20712 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1244368 bp
Thymine Count
1243488 bp
Guanine Count
940616 bp
Cytosine Count
963816 bp
Genome Length
4392288 bp
Protein-coding Genes
3633 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfcc family protein | ODOSP_RS07665 | P39263 | Negative | 1819842 - 1821437 | 57964.7 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | ODOSP_RS07670 | A9IR78 | Positive | 1821664 - 1822482 | 29571.7 |
| diaminopimelate dehydrogenase | ODOSP_RS07675 | Q5L9Q6 | Positive | 1822523 - 1823419 | 32801.7 |
| tlpa disulfide reductase family protein | ODOSP_RS18755 | Not Available | Negative | 1823486 - 1824796 | 50118.8 |
| hypothetical protein | ODOSP_RS07685 | Not Available | Negative | 1824879 - 1826315 | 54384.1 |
| duf4843 domain-containing protein | ODOSP_RS07690 | Not Available | Negative | 1826337 - 1827128 | 30150.4 |
| ragb/susd family nutrient uptake outer membrane protein | ODOSP_RS07695 | Not Available | Negative | 1827140 - 1828585 | 54618.8 |
| susc/raga family tonb-linked outer membrane protein | ODOSP_RS07700 | Not Available | Negative | 1828596 - 1831910 | 124665.0 |
| fecr family protein | ODOSP_RS07705 | Not Available | Negative | 1831941 - 1833119 | 45277.2 |
| rna polymerase sigma-70 factor | ODOSP_RS07710 | Not Available | Negative | 1833197 - 1833751 | 21935.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
