Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Odoribacteraceae
Genus
Odoribacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Odoribacteraceae |
| Genus | Odoribacter |
| Species | Odoribacter splanchnicus |
| Strain | DSM 20712 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Genome Summary
Odoribacter splanchnicus DSM 20712
Accession NumberNC_015160.1
Gene Summary
Adenine Count
1244368 bp
Thymine Count
1243488 bp
Guanine Count
940616 bp
Cytosine Count
963816 bp
Genome Length
4392288 bp
Protein-coding Genes
3633 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | ODOSP_RS00725 | Q5LH04 | + | 168417 - 169109 | 25892.7 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | ODOSP_RS00730 | P32166 | - | 169122 - 170024 | 32872.1 |
| arginine deiminase family protein | ODOSP_RS00735 | A0R969 | - | 170432 - 171715 | 48196.2 |
| magnesium transporter | ODOSP_RS00740 | Q5SMG8 | - | 171937 - 173304 | 50264.9 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | ODOSP_RS00745 | A6LF39 | - | 173328 - 174113 | 30121.5 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | ODOSP_RS00750 | Not Available | + | 174204 - 175223 | 38930.0 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | ODOSP_RS00755 | A6GWQ2 | + | 175249 - 175869 | 23813.8 |
| rna polymerase sigma factor | ODOSP_RS00760 | Not Available | + | 175904 - 176452 | 21544.2 |
| fecr family protein | ODOSP_RS00765 | Not Available | + | 176637 - 177797 | 44682.3 |
| susc/raga family tonb-linked outer membrane protein | ODOSP_RS00770 | Not Available | + | 177818 - 181369 | 133522.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.