Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Odoribacteraceae
Genus
Odoribacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Odoribacteraceae |
| Genus | Odoribacter |
| Species | Odoribacter splanchnicus |
| Strain | DSM 20712 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1244368 bp
Thymine Count
1243488 bp
Guanine Count
940616 bp
Cytosine Count
963816 bp
Genome Length
4392288 bp
Protein-coding Genes
3633 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease subunit alpha | ODOSP_RS06160 | C1D5Z8 | Negative | 1464192 - 1465910 | 61383.8 |
| urease subunit beta | ODOSP_RS06165 | Q2YQD9 | Negative | 1465913 - 1466422 | 18648.1 |
| urease subunit gamma | ODOSP_RS06170 | Q7N4Y9 | Negative | 1466430 - 1466732 | 10925.5 |
| tonb-dependent siderophore receptor | ODOSP_RS06180 | P17315 | Positive | 1467457 - 1469508 | 77327.3 |
| abc transporter substrate-binding protein | ODOSP_RS06185 | Q57550 | Positive | 1469521 - 1470612 | 40700.6 |
| iron abc transporter permease | ODOSP_RS06190 | Q57552 | Positive | 1470605 - 1471660 | 38326.2 |
| abc transporter atp-binding protein | ODOSP_RS06195 | Q57554 | Positive | 1471680 - 1472435 | 27861.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | ODOSP_RS06200 | O29816 | Positive | 1472447 - 1473349 | 33854.6 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1473440 - 1473550 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1473611 - 1473687 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
