Sphaerochaeta globosa str. Buddy

sphereanaerobic

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Sphaerochaetaceae

Genus

Sphaerochaeta

Description

Sphaerochaeta globosa strain Buddy is a Gram-negative, anaerobic bacterium characterized by its spherical shape. This species exhibits non-motile behavior, meaning it does not possess the means for active movement. S. globosa str. Buddy thrives optimally at a temperature of 29°C, placing it within the mesophilic range, which typically encompasses organisms that grow best at moderate temperatures. The genetic makeup of S. globosa str. Buddy is notable for having a single replicon, a feature that can influence its replication and genetic stability. The strain is cataloged under the accession number NC_015152.1, which provides a reference for its genomic information in scientific databases. In terms of ecological significance, the anaerobic nature of S. globosa str. Buddy suggests that it plays a role in environments where oxygen is limited. Such habitats may include sediments, marshes, or other anoxic conditions where organic matter decomposition occurs. The presence of anaerobic bacteria like S. globosa is crucial for nutrient cycling and the breakdown of complex organic materials, contributing to the overall health and function of ecosystems where they are found.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilySphaerochaetaceae
GenusSphaerochaeta
SpeciesSphaerochaeta globosa
StrainBuddy

Profile

Physiology
Gram staining propertiesGram-negative
Shapesphere
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphaerochaeta globosa str. Buddy, complete sequence.

Gene Summary

Adenine Count

847486 bp

Thymine Count

848079 bp

Guanine Count

806298 bp

Cytosine Count

814603 bp

Genome Length

3316466 bp

Protein-coding Genes

3042 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadp-specific glutamate dehydrogenaseSPIBUDDY_RS09895Not AvailablePositive2120959 - 212232049343.9
desulfoferrodoxin family proteinSPIBUDDY_RS09900Not AvailablePositive2122460 - 212284014034.0
abc transporter atp-binding proteinSPIBUDDY_RS09905Not AvailableNegative2122837 - 212355026404.2
abc transporter permeaseSPIBUDDY_RS09910Not AvailableNegative2123532 - 212432029017.6
abc transporter substrate-binding proteinSPIBUDDY_RS09915Not AvailableNegative2124332 - 212530633519.7
tyrosine--trna ligaseSPIBUDDY_RS09920Not AvailableNegative2125359 - 212661547084.4
glycine--trna ligaseSPIBUDDY_RS16185Not AvailableNegative2126617 - 212794850989.5
glutamate--trna ligaseSPIBUDDY_RS16190Not AvailableNegative2127949 - 212943356454.6
hd domain-containing proteinSPIBUDDY_RS15730Not AvailablePositive2129560 - 213027327736.6
alpha/beta hydrolaseSPIBUDDY_RS09940Not AvailableNegative2130270 - 213111231206.2

Displaying genes 1981 – 1990 of 3107 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.