Sphaerochaeta pleomorpha str. Grapes

sphereanaerobic

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Sphaerochaetaceae

Genus

Sphaerochaeta

Description

Sphaerochaeta pleomorpha strain Grapes is a Gram-negative, anaerobic bacterium characterized by its spherical shape and optimal growth temperature of 29.0°C. This species belongs to a group of microorganisms that thrive in low-oxygen environments, which may suggest its adaptation to specific ecological niches where oxygen availability is limited. The Gram-negative nature of S. pleomorpha implies the presence of a thin peptidoglycan layer surrounded by an outer membrane, which can influence its interactions with other microorganisms and its overall stability in various environments. The spherical morphology of this microbe may confer advantages in certain ecological contexts, such as buoyancy in liquid environments or enhanced nutrient uptake in biofilms. Understanding the growth conditions and morphological characteristics of S. pleomorpha str. Grapes can provide insights into its potential role in anaerobic ecosystems, such as those found in deep-sea sediments or within the digestive systems of certain organisms. The optimal temperature of 29.0°C suggests that this microbe may be well-suited to habitats that experience moderate thermal conditions, which could include various natural and anthropogenic environments. In summary, Sphaerochaeta pleomorpha str. Grapes exemplifies how specific traits can reflect an organism's ecological adaptations, particularly in anaerobic settings where it may contribute to biogeochemical cycles or interact with other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilySphaerochaetaceae
GenusSphaerochaeta
SpeciesSphaerochaeta pleomorpha
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shapesphere
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphaerochaeta pleomorpha str. Grapes

Accession NumberNC_016633.1

Gene Summary

Adenine Count

968523 bp

Thymine Count

963453 bp

Guanine Count

831653 bp

Cytosine Count

827224 bp

Genome Length

3590853 bp

Protein-coding Genes

3191 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
phage tail tube proteinSPIGRAPES_RS14055Not Available-3087667 - 308862633123.6
hypothetical proteinSPIGRAPES_RS14060Not Available-3088650 - 308910817073.6
hypothetical proteinSPIGRAPES_RS14065Not Available-3089105 - 308962319231.4
hypothetical proteinSPIGRAPES_RS16680Not Available-3089625 - 309017020134.9
head fiber proteinSPIGRAPES_RS14075Not Available-3090251 - 30904998501.15
Phage major capsid proteinSPIGRAPES_RS14080Not Available-3090512 - 309171444217.9
Putative clp peptidaseSPIGRAPES_RS14085Q28NI7-3091726 - 309245426940.2
Portal proteinSPIGRAPES_RS14090P49859-3092387 - 309371549362.5
Terminase large subunitSPIGRAPES_RS14095P59217-3093734 - 309533560715.9
hypothetical proteinSPIGRAPES_RS14100Not Available-3095407 - 30956318596.27

Displaying genes 1 – 10 of 3269 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

182 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da

Displaying 1–10 of 182 metabolites