Paenibacillus polymyxa E681

Gram-positiveRodMotileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus polymyxa E681 is a Gram-positive, rod-shaped bacterium that serves as a chemoheterotroph, obtaining its energy from organic compounds. This species is classified as a facultative anaerobe, allowing it to thrive in both oxygen-rich and oxygen-poor environments. P. polymyxa E681 displays mobility due to the presence of flagella, enhancing its ability to navigate through diverse habitats. The optimal growth temperature for P. polymyxa E681 is 37°C, making it mesophilic, which implies it can flourish within a temperature range suitable for many biological processes. This bacterium possesses a single replicon and a single membrane, which are characteristic features of its cellular structure. Notably, P. polymyxa E681 is non-pathogenic and engages in free-living biotic relationships, indicating its role in the ecosystem is not associated with disease. One of the remarkable traits of P. polymyxa E681 is its ability to sporulate, which aids in its survival under unfavorable environmental conditions. The sporulation process allows the bacterium to produce spores that can withstand extreme stresses, ensuring its persistence in various habitats. In summary, Paenibacillus polymyxa E681 demonstrates versatile living strategies and adaptive mechanisms that enable it to occupy multiple ecological niches. Its ability to sporulate and thrive in varying oxygen conditions suggests a significant role in nutrient cycling and soil health, highlighting its ecological importance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus polymyxa
StrainE681

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Paenibacillus polymyxa E681
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNo

Genome Summary

Paenibacillus polymyxa E681


Gene Summary

Adenine Count

1461365 bp

Thymine Count

1463194 bp

Guanine Count

1228869 bp

Cytosine Count

1241455 bp

Genome Length

5394883 bp

Protein-coding Genes

4751 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Gp167PPE_RS05235Not AvailableNegative1178243 - 117891425470.6
5'-nucleotidase c-terminal domain-containing proteinPPE_RS05240A9BJC1Negative1179158 - 118104967081.1
Hypothetical proteinPPE_RS05245Not AvailableNegative1181244 - 118166916674.2
Immunity repressor protein (phage-like protein)PPE_RS05250O32236Negative1181681 - 118215418147.3
Arpu-like transcriptional regulatorPPE_RS05255Not AvailablePositive1182458 - 118293418145.6
Hypothetical proteinPPE_RS05260Not AvailablePositive1183405 - 118426531602.8
hypothetical proteinPPE_RS05265Not AvailablePositive1184276 - 11844948114.57
Tail sheath subtilisin-like domain-containing proteinPPE_RS05270Not AvailablePositive1184497 - 118596351748.3
XkdmPPE_RS05275Not AvailablePositive1186086 - 118649315320.2
XkdnPPE_RS05280Not AvailablePositive1186570 - 118700415886.2

Displaying genes 1 – 10 of 4898 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

239 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da

Displaying 1–10 of 239 metabolites

Health Effects

No health effects information available for this bacterium.