Arcobacter nitrofigilis DSM 7299

Gram-negativeBacilliNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Arcobacteraceae

Genus

Arcobacter

Description

Arcobacter nitrofigilis DSM 7299 is a Gram-negative, microaerophilic bacterium characterized by its bacilli shape and the presence of flagella. It is notable for its ability to utilize chemosynthetic processes as an energy source, indicating its role in carbon cycling within its habitat. Arcobacter nitrofigilis is nonsporulating and has a mesophilic temperature range, which aligns with conditions typically found in various environments. This species possesses a single replicon and is surrounded by two membranes, characteristic of Gram-negative bacteria. Importantly, Arcobacter nitrofigilis is categorized as non-pathogenic and engages in symbiotic relationships, suggesting it may play a role in the microbial community dynamics within its habitats. The ability to thrive in diverse environments while relying on chemosynthesis highlights the ecological significance of Arcobacter nitrofigilis, as it may contribute to nutrient cycling and energy flow in ecosystems where it is present. Overall, the traits of Arcobacter nitrofigilis DSM 7299 illustrate its potential importance in maintaining microbial diversity and stability in various ecological niches.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyArcobacteraceae
GenusArcobacter
SpeciesArcobacter nitrofigilis
StrainDSM 7299

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Arcobacter nitrofigilis DSM 7299
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemosynthetic
PathogenicityNo

Genome Summary

Arcobacter nitrofigilis DSM 7299


Gene Summary

Adenine Count

1145389 bp

Thymine Count

1141501 bp

Guanine Count

452625 bp

Cytosine Count

452720 bp

Genome Length

3192235 bp

Protein-coding Genes

3131 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosomal replication initiator protein dnaaARNIT_RS00005A8EQT0Positive71 - 138449825.4
dna polymerase iii subunit betaARNIT_RS00010Q9ZLX4Positive1545 - 261540516.8
dna topoisomerase (atp-hydrolyzing) subunit bARNIT_RS00015O87667Positive2629 - 494786883.8
type ii toxin-antitoxin system rele/pare family toxinARNIT_RS00020Not AvailablePositive5120 - 545212637.6
helix-turn-helix domain-containing proteinARNIT_RS00025Not AvailablePositive5442 - 574111136.4
m48 family metallopeptidaseARNIT_RS00030P42597Positive5806 - 630919917.4
duf3010 family proteinARNIT_RS00035Not AvailablePositive6548 - 694314877.9
trap transporter substrate-binding proteinARNIT_RS00040Q8YSQ6Positive7254 - 826736972.0
trap transporter small permease subunitARNIT_RS00045Not AvailablePositive8267 - 877919921.2
trap transporter large permease subunitARNIT_RS00050Not AvailablePositive8779 - 1010447272.4

Displaying genes 1 – 10 of 3201 in total

Metabolites

1833 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da

Displaying 1–10 of 1833 metabolites

Health Effects

No health effects information available for this bacterium.