Escherichia coli O55:H7 str. CB9615

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli O55:H7 str. CB9615 is a Gram-negative, rod-shaped bacterium characterized by its facultative anaerobic metabolism, allowing it to thrive in various oxygen conditions. This strain exhibits mobility due to the presence of flagella and typically shows a cellular arrangement in pairs or singles. E. coli O55:H7 is mesophilic, with an optimal growth temperature of 37°C, which is consistent with its association with warm-blooded hosts. The bacterium has two replicons and is surrounded by two membranes, typical of Gram-negative organisms. It is nonsporulating and exists in a free-living biotic relationship, indicating that it can survive independently in its environment. E. coli strains, including O55:H7, are often associated with various ecological niches, particularly in the intestines of animals and humans. Their ability to adapt to different conditions and their mobility plays a critical role in their ecological dynamics, including nutrient cycling and interactions with other microbial communities. The specific traits of E. coli O55:H7 str. CB9615 highlight its adaptability and role within its habitat. Understanding these attributes can provide insights into its behavior in host environments and its potential impact on human and animal health. Further research may be necessary to explore its specific ecological roles and interactions within the microbiome.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainCB9615

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O55:H7 str. CB9615
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli O55:H7 str. CB9615


Gene Summary

Adenine Count

1336274 bp

Thymine Count

1328728 bp

Guanine Count

1360974 bp

Cytosine Count

1360376 bp

Genome Length

5386352 bp

Protein-coding Genes

4579 genes

Non-Coding Genes

771 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
antirestriction proteinG2583_RS27210Q9S4W7Positive51 - 45215148.0
duf1380 family proteinG2583_RS27215O82902Positive499 - 92115698.7
hypothetical proteinG2583_RS27220Not AvailablePositive918 - 11097291.78
hypothetical proteinG2583_RS27235Not AvailablePositive1608 - 18147449.25
hypothetical proteinG2583_RS27240Q02885Positive1839 - 212611008.2
duf932 domain-containing proteinG2583_RS27245P18005Positive2245 - 306631534.6
is4 family transposaseG2583_RS27250P30192Positive3345 - 468550791.7
transglycosylase slt domain-containing proteinG2583_RS27255P47737Negative4806 - 540822813.7
conjugal transfer relaxosome dna-binding protein tramG2583_RS27260P10026Positive5729 - 611214518.3
hypothetical proteinG2583_RS31465P06626Positive6299 - 698826937.1

Displaying genes 1 – 10 of 5435 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4789 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4789 metabolites

Health Effects

No health effects information available for this bacterium.