Capnocytophaga ochracea DSM 7271

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Capnocytophaga

Description

Capnocytophaga ochracea DSM 7271 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and tendency to form chains or exist as single cells. It is classified as a chemoorganotroph, meaning it derives its energy from organic compounds. This organism is nonsporulating and possesses two membranes surrounding its cell structure, indicating its classification as a member of the phylum Proteobacteria. C. ochracea is primarily free-living in various habitats, including those associated with mammals. It has been identified in association with hosts such as Homo sapiens, Canis lupus familiaris, Felis catus, and other members of Mammalia. Its pathogenicity suggests that it has the potential to cause disease in these hosts, although specific pathogenic mechanisms or disease associations are not detailed in the provided information. The optimal growth temperature for C. ochracea is around 35°C, placing it within the mesophilic temperature range. It does not exhibit mobility, despite the presence of flagella, which may serve other functions rather than locomotion. This bacterium has a single replicon, which is characteristic of many bacteria and aids in its cellular replication processes. Understanding the ecological role of C. ochracea within its environment, particularly its interactions with mammalian hosts, could provide insight into its potential impact on host health and the dynamics of microbial communities. Given its pathogenic potential, further studies might explore the specific conditions under which it can influence host physiology or contribute to disease.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCapnocytophaga
SpeciesCapnocytophaga ochracea
StrainDSM 7271

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Capnocytophaga ochracea DSM 7271
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature35
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Canis lupus familiaris, Felis catus
Cell arrangementChains - Singles
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityYes

Genome Summary

Capnocytophaga ochracea DSM 7271


Gene Summary

Adenine Count

789447 bp

Thymine Count

789074 bp

Guanine Count

517190 bp

Cytosine Count

517214 bp

Genome Length

2612925 bp

Protein-coding Genes

2165 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive1017380 - 1017395Not Available
3_nc_021792: site specific recombinase, tyrosineCOCH_RS04280Not AvailablePositive1017454 - 101874349727.8
helix-turn-helix domain-containing proteinCOCH_RS04285Not AvailableNegative1018757 - 101902910778.2
hypothetical proteinCOCH_RS04290Not AvailableNegative1019149 - 10193618461.11
hypothetical proteinCOCH_RS04300Not AvailablePositive1020066 - 102112138696.5
hypothetical proteinCOCH_RS04305Not AvailablePositive1021147 - 102222339991.6
1_nc_021800: hypothetical proteinCOCH_RS04310Not AvailablePositive1022297 - 102286620880.6
hypothetical proteinCOCH_RS04315Not AvailablePositive1022887 - 102334517402.7
1_nc_021800: phage portal proteinCOCH_RS04320Not AvailablePositive1023369 - 102453844654.7
1_nc_021800: structural proteinCOCH_RS04325Not AvailablePositive1024535 - 102505920516.6

Displaying genes 1 – 10 of 2253 in total

Metabolites

443 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 443 metabolites

Health Effects

No health effects information available for this bacterium.