Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlpa family protein disulfide reductase | PHEP_RS04765 | Not Available | Positive | 1108704 - 1110053 | 50561.7 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS04770 | Not Available | Positive | 1110075 - 1111427 | 51011.8 |
| bnr repeat-containing protein | PHEP_RS04775 | Not Available | Positive | 1111813 - 1113228 | 53767.6 |
| rna polymerase sigma factor | PHEP_RS04780 | Not Available | Negative | 1113267 - 1113860 | 22900.0 |
| fecr family protein | PHEP_RS04785 | Not Available | Positive | 1114029 - 1115180 | 43007.6 |
| tonb-dependent receptor | PHEP_RS04790 | Not Available | Positive | 1115366 - 1118761 | 123837.0 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS04795 | Not Available | Positive | 1118772 - 1120652 | 68314.0 |
| duf5017 domain-containing protein | PHEP_RS04800 | Not Available | Positive | 1120695 - 1121639 | 33977.2 |
| alpha-l-rhamnosidase c-terminal domain-containing protein | PHEP_RS04805 | Not Available | Positive | 1121657 - 1123414 | 65551.6 |
| glycoside hydrolase family 88 protein | PHEP_RS04810 | Not Available | Positive | 1123431 - 1124648 | 46038.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
