Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS04715 | Not Available | Positive | 1095772 - 1096281 | 19104.6 |
| glycosyl hydrolase | PHEP_RS04720 | Not Available | Negative | 1096353 - 1099235 | 107059.0 |
| alpha/beta hydrolase | PHEP_RS04725 | Not Available | Negative | 1099254 - 1099970 | 27428.6 |
| class i sam-dependent methyltransferase | PHEP_RS04730 | Not Available | Negative | 1100161 - 1100787 | 23981.7 |
| nad(+)--rifampin adp-ribosyltransferase | PHEP_RS22435 | Not Available | Positive | 1101353 - 1101766 | 14999.6 |
| hypothetical protein | PHEP_RS04740 | Not Available | Negative | 1101803 - 1102159 | 12874.0 |
| nadph-dependent fmn reductase | PHEP_RS04745 | Not Available | Negative | 1102490 - 1103032 | 20114.2 |
| rna polymerase sigma-70 factor | PHEP_RS04750 | Not Available | Positive | 1103157 - 1103726 | 22053.7 |
| fecr family protein | PHEP_RS04755 | Not Available | Positive | 1103844 - 1104962 | 40893.7 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS04760 | Not Available | Positive | 1105215 - 1108682 | 128221.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
