Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna cytosine methyltransferase | PHEP_RS04665 | Not Available | Positive | 1083384 - 1084808 | 55833.7 |
| dna cytosine methyltransferase | PHEP_RS04670 | Not Available | Positive | 1084811 - 1085863 | 40469.3 |
| hnh endonuclease | PHEP_RS21430 | Not Available | Positive | 1085865 - 1086980 | 42510.9 |
| atp-binding protein | PHEP_RS04680 | Not Available | Positive | 1086989 - 1088449 | 56287.9 |
| endonuclease | PHEP_RS22395 | Not Available | Positive | 1088455 - 1090125 | 63723.9 |
| z1 domain-containing protein | PHEP_RS22400 | Not Available | Positive | 1090151 - 1091206 | 40584.6 |
| pd-(d/e)xk motif protein | PHEP_RS04695 | Not Available | Positive | 1091199 - 1092200 | 38455.6 |
| aipr family protein | PHEP_RS04700 | Not Available | Positive | 1092202 - 1094220 | 77558.3 |
| duf6266 family protein | PHEP_RS04705 | Not Available | Positive | 1094220 - 1094702 | 17928.4 |
| winged helix-turn-helix domain-containing protein | PHEP_RS04710 | Not Available | Negative | 1094721 - 1095611 | 33238.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
