Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS04615 | Not Available | Positive | 1074568 - 1075614 | 39571.4 |
| duf6266 family protein | PHEP_RS04620 | Not Available | Positive | 1075821 - 1076462 | 23158.6 |
| hypothetical protein | PHEP_RS04625 | Not Available | Positive | 1076459 - 1077316 | 32007.2 |
| duf6266 family protein | PHEP_RS04630 | Not Available | Positive | 1077543 - 1078190 | 23301.0 |
| hypothetical protein | PHEP_RS04635 | Not Available | Positive | 1078351 - 1078743 | 14761.7 |
| peptidoglycan-binding protein | PHEP_RS04640 | Not Available | Positive | 1078662 - 1079177 | 18884.8 |
| hypothetical protein | PHEP_RS04645 | Not Available | Positive | 1079413 - 1080423 | 38524.0 |
| nucleotide pyrophosphohydrolase | PHEP_RS04650 | Not Available | Positive | 1080433 - 1080765 | 12882.3 |
| duf2075 domain-containing protein | PHEP_RS04655 | Not Available | Positive | 1080898 - 1082805 | 72406.5 |
| very short patch repair endonuclease | PHEP_RS04660 | Not Available | Positive | 1082802 - 1083224 | 16482.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
