Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maue/doxx family redox-associated membrane protein | PHEP_RS04560 | Not Available | Positive | 1068240 - 1068695 | 17595.0 |
| hypothetical protein | PHEP_RS04565 | Not Available | Positive | 1068745 - 1069182 | 16109.9 |
| hypothetical protein | PHEP_RS04570 | Not Available | Positive | 1069187 - 1070239 | 39527.2 |
| hypothetical protein | PHEP_RS04575 | Not Available | Positive | 1070482 - 1071099 | 23674.1 |
| helix-turn-helix domain-containing protein | PHEP_RS04580 | Not Available | Positive | 1071080 - 1071400 | 12158.9 |
| hypothetical protein | PHEP_RS04585 | Not Available | Positive | 1071546 - 1071848 | 11107.5 |
| hypothetical protein | PHEP_RS04590 | Not Available | Positive | 1071849 - 1072271 | 16351.1 |
| crp/fnr family transcriptional regulator | PHEP_RS04600 | Not Available | Positive | 1072812 - 1073474 | 25671.6 |
| maue/doxx family redox-associated membrane protein | PHEP_RS04605 | Not Available | Positive | 1073560 - 1074141 | 22263.8 |
| hypothetical protein | PHEP_RS04610 | Not Available | Positive | 1074225 - 1074485 | 9118.85 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
