Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | PHEP_RS00405 | Not Available | Positive | 89134 - 90588 | 53488.9 |
| s66 peptidase family protein | PHEP_RS00410 | Not Available | Negative | 90676 - 91575 | 33004.8 |
| methionine--trna ligase | PHEP_RS00415 | Not Available | Positive | 91617 - 93725 | 79658.9 |
| glycoside hydrolase family 2 protein | PHEP_RS00420 | Not Available | Positive | 93777 - 95621 | 69244.2 |
| Trna-arg | Not Available | Not Available | Positive | 95728 - 95799 | Not Available |
| trove domain-containing protein | PHEP_RS00430 | Not Available | Negative | 96605 - 98185 | 59126.6 |
| rtcb family protein | PHEP_RS00435 | Not Available | Negative | 98288 - 99742 | 52671.5 |
| helix-turn-helix transcriptional regulator | PHEP_RS00440 | Not Available | Positive | 99846 - 100892 | 40667.7 |
| dienelactone hydrolase family protein | PHEP_RS00445 | Not Available | Negative | 100922 - 101674 | 28255.3 |
| had-iia family hydrolase | PHEP_RS00450 | Not Available | Negative | 101680 - 102453 | 28060.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
