Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit alpha | PHEP_RS04360 | Not Available | Positive | 1019140 - 1023570 | 167103.0 |
| thioredoxin | PHEP_RS04365 | Not Available | Positive | 1023694 - 1024011 | 11634.1 |
| duf58 domain-containing protein | PHEP_RS04370 | Not Available | Positive | 1024028 - 1024996 | 37572.4 |
| aspartate aminotransferase family protein | PHEP_RS04375 | Not Available | Negative | 1024993 - 1026180 | 43115.6 |
| hypothetical protein | PHEP_RS04380 | Not Available | Negative | 1026199 - 1026651 | 18151.0 |
| hypothetical protein | PHEP_RS04385 | Not Available | Negative | 1026662 - 1027144 | 18117.3 |
| rna polymerase sigma factor | PHEP_RS04390 | Not Available | Negative | 1027179 - 1027739 | 21986.3 |
| transketolase family protein | PHEP_RS04395 | Not Available | Negative | 1027760 - 1028719 | 34530.8 |
| transketolase | PHEP_RS04400 | Not Available | Negative | 1028722 - 1029588 | 31650.7 |
| sugar mfs transporter | PHEP_RS04405 | Not Available | Positive | 1029814 - 1031103 | 46306.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
