Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome hibernation-promoting factor, hpf/yfia family | PHEP_RS04210 | Not Available | Positive | 992376 - 992723 | 13343.0 |
| Trna-thr | Not Available | Not Available | Positive | 992931 - 993003 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 993041 - 993123 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 993134 - 993206 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 993249 - 993320 | Not Available |
| elongation factor tu | PHEP_RS04235 | Not Available | Positive | 993442 - 994629 | 43027.9 |
| Trna-trp | Not Available | Not Available | Positive | 994742 - 994812 | Not Available |
| preprotein translocase subunit sece | PHEP_RS04245 | Not Available | Positive | 994826 - 995023 | 7307.94 |
| transcription termination/antitermination protein nusg | PHEP_RS04250 | Not Available | Positive | 995033 - 995575 | 20579.2 |
| 50s ribosomal protein l11 | PHEP_RS04255 | Not Available | Positive | 995640 - 996083 | 15579.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
