Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS04160 | Not Available | Positive | 982100 - 983599 | 52022.8 |
| hypothetical protein | PHEP_RS04165 | Not Available | Positive | 983795 - 984328 | 20176.5 |
| hypothetical protein | PHEP_RS04170 | Not Available | Negative | 984352 - 985557 | 47366.6 |
| lysophospholipid acyltransferase family protein | PHEP_RS04175 | Not Available | Negative | 985825 - 987576 | 66869.8 |
| comea family dna-binding protein | PHEP_RS04180 | Not Available | Positive | 987744 - 988643 | 34968.8 |
| adenine phosphoribosyltransferase | PHEP_RS04185 | Not Available | Positive | 988646 - 989173 | 19316.9 |
| acyl-coa dehydrogenase family protein | PHEP_RS04190 | Not Available | Positive | 989386 - 990558 | 42322.0 |
| hypothetical protein | PHEP_RS04195 | Not Available | Negative | 990633 - 991004 | 14030.2 |
| 30s ribosomal protein s21 | PHEP_RS04200 | Not Available | Positive | 991158 - 991352 | 7564.4 |
| tyrosine-type recombinase/integrase | PHEP_RS04205 | Not Available | Positive | 991477 - 992361 | 34032.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
