Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | PHEP_RS04110 | Not Available | Positive | 970372 - 971217 | 32248.9 |
| prolipoprotein diacylglyceryl transferase | PHEP_RS04115 | Not Available | Positive | 971230 - 971964 | 28130.5 |
| radical sam protein | PHEP_RS04120 | Not Available | Positive | 971961 - 973352 | 53397.4 |
| hypothetical protein | PHEP_RS04125 | Not Available | Positive | 973366 - 973569 | 6926.21 |
| phenylalanine--trna ligase subunit beta | PHEP_RS04130 | Not Available | Positive | 973621 - 976020 | 87981.7 |
| hypothetical protein | PHEP_RS04135 | Not Available | Positive | 976032 - 976322 | 10851.2 |
| cell division protein zapa | PHEP_RS04140 | Not Available | Positive | 976355 - 976645 | 11152.3 |
| ribonuclease y | PHEP_RS04145 | Not Available | Positive | 976959 - 978512 | 57996.3 |
| duf962 domain-containing protein | PHEP_RS04150 | Not Available | Positive | 978600 - 979127 | 20024.1 |
| tonb-dependent receptor | PHEP_RS04155 | Not Available | Positive | 979240 - 982041 | 103603.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
