Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing sensor histidine kinase | PHEP_RS03960 | Not Available | Positive | 938368 - 939558 | 43671.8 |
| putative sensor domain dacnv-containing protein | PHEP_RS03965 | Not Available | Positive | 939572 - 940915 | 51748.1 |
| response regulator transcription factor | PHEP_RS03970 | Not Available | Positive | 941051 - 941413 | 14002.9 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | PHEP_RS03975 | Not Available | Positive | 941510 - 943915 | 89115.5 |
| mlad family protein | PHEP_RS03980 | Not Available | Negative | 944038 - 945024 | 35670.9 |
| abc transporter atp-binding protein | PHEP_RS03985 | Not Available | Negative | 945028 - 945795 | 28768.1 |
| mlae family abc transporter permease | PHEP_RS03990 | Not Available | Negative | 945805 - 946545 | 26636.7 |
| class i sam-dependent methyltransferase | PHEP_RS03995 | Not Available | Positive | 946783 - 947472 | 25407.9 |
| hypothetical protein | PHEP_RS04000 | Not Available | Positive | 947564 - 947929 | 13949.1 |
| ferritin | PHEP_RS04005 | Not Available | Positive | 948033 - 948563 | 20711.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
