Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gh92 family glycosyl hydrolase | PHEP_RS03810 | Not Available | Positive | 886792 - 889497 | 101385.0 |
| atp-binding protein | PHEP_RS03815 | Not Available | Positive | 889602 - 891536 | 72593.1 |
| tonb-dependent receptor | PHEP_RS03820 | Not Available | Positive | 891581 - 893932 | 85424.2 |
| pepsy-associated tm helix domain-containing protein | PHEP_RS03825 | Not Available | Positive | 893935 - 895017 | 41344.4 |
| metallophosphoesterase family protein | PHEP_RS03830 | Not Available | Negative | 895010 - 896005 | 36634.2 |
| dinb family protein | PHEP_RS03835 | Not Available | Negative | 896039 - 896536 | 18894.8 |
| universal stress protein | PHEP_RS03840 | Not Available | Positive | 896614 - 897756 | 42729.8 |
| putative glycoside hydrolase | PHEP_RS03845 | Not Available | Positive | 897851 - 899029 | 43744.6 |
| rhamnogalacturonan acetylesterase | PHEP_RS03850 | Not Available | Negative | 899057 - 899833 | 29223.3 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS03855 | Not Available | Positive | 900051 - 903293 | 118941.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
