Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS03760 | Not Available | Negative | 871789 - 872988 | 44054.5 |
| smug2 dna glycosylase family protein | PHEP_RS03765 | Not Available | Negative | 873191 - 873901 | 27105.7 |
| gntr family transcriptional regulator | PHEP_RS03770 | Not Available | Negative | 873908 - 874639 | 28134.0 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS03775 | Not Available | Positive | 874966 - 878082 | 113457.0 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS03780 | Not Available | Positive | 878100 - 879584 | 55027.4 |
| class i mannose-6-phosphate isomerase | PHEP_RS03785 | Not Available | Positive | 879624 - 881387 | 66370.0 |
| sugar porter family mfs transporter | PHEP_RS03790 | Not Available | Positive | 881398 - 882762 | 49151.5 |
| lipocalin family protein | PHEP_RS03795 | Not Available | Positive | 882788 - 883582 | 29555.9 |
| duf4185 domain-containing protein | PHEP_RS03800 | Not Available | Positive | 883600 - 884802 | 44170.1 |
| sialate o-acetylesterase | PHEP_RS03805 | Not Available | Positive | 884807 - 886780 | 73387.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
