Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monofunctional biosynthetic peptidoglycan transglycosylase | PHEP_RS03710 | Not Available | Positive | 864334 - 865059 | 27938.5 |
| hypothetical protein | PHEP_RS03715 | Not Available | Negative | 865060 - 865539 | 18392.6 |
| hypothetical protein | PHEP_RS03720 | Not Available | Positive | 865590 - 866069 | 18711.6 |
| mbl fold metallo-hydrolase | PHEP_RS03725 | Not Available | Negative | 866035 - 866832 | 29670.5 |
| (fe-s)-binding protein | PHEP_RS03730 | Not Available | Negative | 866822 - 867622 | 29510.6 |
| 4fe-4s dicluster domain-containing protein | PHEP_RS03735 | Not Available | Negative | 867655 - 868932 | 47710.5 |
| Trna-phe | Not Available | Not Available | Positive | 869144 - 869216 | Not Available |
| hypothetical protein | PHEP_RS03745 | Not Available | Positive | 869361 - 869927 | 21342.5 |
| hypothetical protein | PHEP_RS03750 | Not Available | Positive | 869948 - 871036 | 41443.8 |
| hypothetical protein | PHEP_RS03755 | Not Available | Negative | 871050 - 871787 | 27396.7 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
