Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | PHEP_RS03660 | Not Available | Negative | 851666 - 853732 | 76806.9 |
| tonb-dependent receptor | PHEP_RS03665 | Not Available | Negative | 853782 - 856496 | 102370.0 |
| nadp-dependent isocitrate dehydrogenase | PHEP_RS03670 | Not Available | Positive | 856671 - 858890 | 79573.7 |
| hypothetical protein | PHEP_RS03675 | Not Available | Positive | 859016 - 859438 | 15822.5 |
| dna polymerase iii subunit gamma/tau | PHEP_RS03680 | Not Available | Negative | 859475 - 861283 | 67631.2 |
| arac family transcriptional regulator | PHEP_RS03685 | Not Available | Negative | 861377 - 862249 | 33391.0 |
| hypothetical protein | PHEP_RS03690 | Not Available | Positive | 862415 - 863008 | 22663.2 |
| 30s ribosomal protein s6 | PHEP_RS03695 | Not Available | Positive | 863168 - 863527 | 13623.5 |
| 30s ribosomal protein s18 | PHEP_RS03700 | Not Available | Positive | 863527 - 863790 | 10212.6 |
| 50s ribosomal protein l9 | PHEP_RS03705 | Not Available | Positive | 863801 - 864244 | 16288.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
