Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5000 domain-containing lipoprotein | PHEP_RS03560 | Not Available | Positive | 823779 - 825026 | 46626.7 |
| duf4998 domain-containing protein | PHEP_RS03565 | Not Available | Positive | 825124 - 826314 | 44526.6 |
| duf4998 domain-containing protein | PHEP_RS21420 | Not Available | Positive | 826478 - 827932 | 52860.4 |
| putative ig domain-containing protein | PHEP_RS03575 | Not Available | Positive | 827995 - 829572 | 58809.2 |
| hypothetical protein | PHEP_RS03580 | Not Available | Positive | 829575 - 830048 | 17890.6 |
| glycoside hydrolase family 28 protein | PHEP_RS03585 | Not Available | Positive | 830045 - 831724 | 59940.2 |
| hypothetical protein | PHEP_RS03590 | Not Available | Positive | 831728 - 832255 | 19781.6 |
| carboxypeptidase-like regulatory domain-containing protein | PHEP_RS03595 | Not Available | Positive | 832221 - 834584 | 87170.8 |
| hypothetical protein | PHEP_RS03600 | Not Available | Negative | 834588 - 835082 | 18110.7 |
| bifunctional helix-turn-helix domain-containing protein/methylated-dna--[protein]-cysteine s-methyltransferase | PHEP_RS03605 | Not Available | Negative | 835138 - 835977 | 31253.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
