Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine-rich cwc family protein | PHEP_RS03460 | Not Available | Positive | 801498 - 801701 | 7667.21 |
| carbon-nitrogen hydrolase | PHEP_RS03465 | Not Available | Positive | 801787 - 802662 | 32869.0 |
| agmatine deiminase family protein | PHEP_RS03470 | Not Available | Positive | 802758 - 803807 | 39461.6 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | PHEP_RS03475 | Not Available | Positive | 803849 - 804592 | 26284.7 |
| l,d-transpeptidase family protein | PHEP_RS03480 | Not Available | Negative | 804596 - 805330 | 27916.8 |
| hypothetical protein | PHEP_RS03485 | Not Available | Positive | 805413 - 807500 | 77996.1 |
| trimeric intracellular cation channel family protein | PHEP_RS03490 | Not Available | Positive | 807513 - 808124 | 22425.5 |
| ftsb family cell division protein | PHEP_RS03495 | Not Available | Negative | 808121 - 808420 | 11958.4 |
| hypothetical protein | PHEP_RS03500 | Not Available | Negative | 808470 - 808658 | 6836.76 |
| phosphopyruvate hydratase | PHEP_RS03505 | Not Available | Negative | 808748 - 810043 | 46382.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
