Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlpa family protein disulfide reductase | PHEP_RS00305 | Not Available | Positive | 67122 - 67715 | 21825.9 |
| hypothetical protein | PHEP_RS00310 | Not Available | Positive | 67854 - 68252 | 15651.1 |
| penicillin-binding protein activator lpob | PHEP_RS00315 | Not Available | Positive | 68285 - 68878 | 22147.6 |
| cog3014 family protein | PHEP_RS00320 | Not Available | Positive | 68905 - 70338 | 53614.6 |
| hypothetical protein | PHEP_RS00325 | Not Available | Positive | 70377 - 70625 | 9460.76 |
| yifb family mg chelatase-like aaa atpase | PHEP_RS00330 | Not Available | Negative | 70622 - 72160 | 55980.0 |
| signal recognition particle protein | PHEP_RS00335 | Not Available | Negative | 72249 - 73589 | 49205.1 |
| duf3078 domain-containing protein | PHEP_RS00340 | Not Available | Negative | 73672 - 74697 | 38866.6 |
| hypothetical protein | PHEP_RS00345 | Not Available | Negative | 74722 - 75045 | 13249.6 |
| hypothetical protein | PHEP_RS00350 | Not Available | Negative | 75042 - 75794 | 28596.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
