Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS03360 | Not Available | Positive | 782047 - 782406 | 13566.7 |
| hypothetical protein | PHEP_RS03365 | Not Available | Positive | 782484 - 782684 | 7350.96 |
| osmc family protein | PHEP_RS03370 | Not Available | Negative | 782688 - 783101 | 15058.4 |
| glycoside hydrolase family 9 protein | PHEP_RS03375 | Not Available | Positive | 783456 - 786686 | 121398.0 |
| arac family transcriptional regulator | PHEP_RS03380 | Not Available | Positive | 786737 - 787519 | 29971.1 |
| dihydrofolate reductase family protein | PHEP_RS03385 | Not Available | Positive | 787585 - 788121 | 19770.8 |
| deor/glpr family dna-binding transcription regulator | PHEP_RS03390 | Not Available | Negative | 788122 - 788865 | 27537.8 |
| rok family protein | PHEP_RS03395 | Not Available | Positive | 789047 - 790024 | 34692.8 |
| mfs transporter | PHEP_RS03400 | Not Available | Positive | 790014 - 791168 | 40787.7 |
| sugar isomerase domain-containing protein | PHEP_RS03405 | Not Available | Positive | 791187 - 791948 | 28193.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
