Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | PHEP_RS03265 | Not Available | Positive | 761190 - 761627 | 15848.6 |
| duf5606 domain-containing protein | PHEP_RS03270 | Not Available | Positive | 761629 - 762165 | 19142.1 |
| hypothetical protein | PHEP_RS22390 | Not Available | Negative | 762235 - 762363 | 5159.43 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | PHEP_RS03275 | Not Available | Negative | 762423 - 762896 | 18105.1 |
| muts-related protein | PHEP_RS03280 | Not Available | Positive | 763000 - 764814 | 68430.9 |
| gh1 family beta-glucosidase | PHEP_RS03285 | Not Available | Positive | 764852 - 766189 | 50588.4 |
| putative signal transducing protein | PHEP_RS03290 | Not Available | Positive | 766228 - 766641 | 15426.6 |
| duf3575 domain-containing protein | PHEP_RS03295 | Not Available | Negative | 766697 - 767224 | 18876.7 |
| aconitate hydratase | PHEP_RS03300 | Not Available | Negative | 767370 - 769646 | 81540.0 |
| polysaccharide deacetylase family protein | PHEP_RS03305 | Not Available | Negative | 769941 - 770558 | 24027.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
