Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | PHEP_RS03165 | Not Available | Positive | 738077 - 739291 | 45947.7 |
| molecular chaperone dnak | PHEP_RS03170 | Not Available | Positive | 739457 - 741376 | 68678.2 |
| nucleotidyltransferase family protein | PHEP_RS03175 | Not Available | Negative | 741448 - 742350 | 34066.4 |
| helicase hera-like domain-containing protein | PHEP_RS03180 | Not Available | Negative | 742449 - 743990 | 55912.7 |
| m42 family metallopeptidase | PHEP_RS03185 | Not Available | Negative | 744039 - 745154 | 41476.6 |
| gnat family n-acetyltransferase | PHEP_RS03190 | Not Available | Negative | 745206 - 745625 | 16151.6 |
| mfs transporter | PHEP_RS03195 | Not Available | Negative | 745628 - 746791 | 42301.2 |
| acyl-coa carboxylase subunit beta | PHEP_RS03200 | Not Available | Negative | 746791 - 748332 | 56017.9 |
| porin | PHEP_RS03205 | Not Available | Negative | 748368 - 749600 | 46082.1 |
| hypothetical protein | PHEP_RS03210 | Not Available | Positive | 749802 - 750140 | 12826.7 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
