Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit secy | PHEP_RS03120 | Not Available | Positive | 731583 - 732917 | 48234.5 |
| type i methionyl aminopeptidase | PHEP_RS03125 | Not Available | Positive | 732926 - 733714 | 28476.1 |
| translation initiation factor if-1 | PHEP_RS03130 | Not Available | Positive | 733782 - 734000 | 8308.24 |
| type b 50s ribosomal protein l36 | PHEP_RS21865 | Not Available | Positive | 734002 - 734118 | 4518.77 |
| 30s ribosomal protein s13 | PHEP_RS03135 | Not Available | Positive | 734231 - 734608 | 14090.2 |
| 30s ribosomal protein s11 | PHEP_RS03140 | Not Available | Positive | 734630 - 735019 | 13788.8 |
| 30s ribosomal protein s4 | PHEP_RS03145 | Not Available | Positive | 735085 - 735693 | 22896.6 |
| dna-directed rna polymerase subunit alpha | PHEP_RS03150 | Not Available | Positive | 735771 - 736763 | 37196.9 |
| 50s ribosomal protein l17 | PHEP_RS03155 | Not Available | Positive | 736854 - 737405 | 20415.5 |
| 2'-5' rna ligase family protein | PHEP_RS03160 | Not Available | Negative | 737465 - 738019 | 21545.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
