Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS02970 | Not Available | Negative | 714633 - 715268 | 23470.1 |
| vf530 family dna-binding protein | PHEP_RS02975 | Not Available | Positive | 715324 - 715545 | 8689.55 |
| acyloxyacyl hydrolase | PHEP_RS02980 | Not Available | Positive | 715575 - 716702 | 42097.9 |
| 30s ribosomal protein s12 | PHEP_RS02985 | Not Available | Positive | 716837 - 717250 | 15065.5 |
| 30s ribosomal protein s7 | PHEP_RS02990 | Not Available | Positive | 717267 - 717734 | 17547.5 |
| elongation factor g | PHEP_RS02995 | Not Available | Positive | 717752 - 719866 | 77766.0 |
| 30s ribosomal protein s10 | PHEP_RS03000 | Not Available | Positive | 719931 - 720236 | 11418.2 |
| hypothetical protein | PHEP_RS03005 | Not Available | Negative | 720303 - 720911 | 22772.3 |
| sulfite exporter taue/safe family protein | PHEP_RS03010 | Not Available | Positive | 720993 - 721829 | 28899.7 |
| duf1634 domain-containing protein | PHEP_RS03015 | Not Available | Positive | 721826 - 722221 | 14475.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
