Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-phosphate pyrophosphokinase | PHEP_RS02920 | Not Available | Positive | 702805 - 703746 | 34138.5 |
| 50s ribosomal protein l25/general stress protein ctc | PHEP_RS02925 | Not Available | Positive | 703808 - 704386 | 21343.2 |
| aminoacyl-trna hydrolase | PHEP_RS02930 | Not Available | Positive | 704523 - 705083 | 20613.2 |
| response regulator | PHEP_RS02935 | Not Available | Negative | 705073 - 706659 | 59402.6 |
| cher family methyltransferase | PHEP_RS02940 | Not Available | Negative | 706688 - 707512 | 31837.1 |
| response regulator | PHEP_RS02945 | Not Available | Negative | 707514 - 710999 | 130129.0 |
| lytr/algr family response regulator transcription factor | PHEP_RS02950 | Not Available | Negative | 711043 - 711726 | 25925.4 |
| sensor histidine kinase | PHEP_RS02955 | Not Available | Negative | 711735 - 713249 | 57813.0 |
| arsenate reductase | PHEP_RS02960 | Not Available | Positive | 713315 - 713710 | 14920.2 |
| hypothetical protein | PHEP_RS02965 | Not Available | Positive | 713778 - 714509 | 27734.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
