Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS02865 | Not Available | Positive | 690209 - 690697 | 17973.4 |
| calcineurin-like phosphoesterase c-terminal domain-containing protein | PHEP_RS02870 | Not Available | Positive | 690805 - 692217 | 53383.0 |
| duf6528 family protein | PHEP_RS02875 | Not Available | Positive | 692262 - 693230 | 35793.7 |
| glycerophosphodiester phosphodiesterase family protein | PHEP_RS02880 | Not Available | Positive | 693230 - 694132 | 33715.1 |
| glycerol-3-phosphate transporter | PHEP_RS02885 | Not Available | Positive | 694183 - 695529 | 50106.4 |
| gdsl-type esterase/lipase family protein | PHEP_RS02890 | Not Available | Positive | 695564 - 696250 | 26013.7 |
| fatty acid desaturase family protein | PHEP_RS02895 | Not Available | Negative | 696261 - 697397 | 43424.9 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | PHEP_RS02900 | Not Available | Positive | 697680 - 698633 | 35853.5 |
| duf2723 domain-containing protein | PHEP_RS02905 | Not Available | Negative | 699005 - 702034 | 114262.0 |
| Trna-gln | Not Available | Not Available | Positive | 702662 - 702735 | Not Available |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
