Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS02815 | Not Available | Positive | 671271 - 672389 | 42843.5 |
| bt_3044 domain-containing protein | PHEP_RS02820 | Not Available | Negative | 672842 - 673738 | 33501.3 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS02825 | Not Available | Negative | 673761 - 675782 | 75712.5 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS02830 | Not Available | Negative | 675804 - 678935 | 116027.0 |
| ipt/tig domain-containing protein | PHEP_RS02835 | Not Available | Negative | 679040 - 680401 | 50048.1 |
| deor/glpr family dna-binding transcription regulator | PHEP_RS02840 | Not Available | Negative | 680728 - 681492 | 27874.9 |
| glycerol-3-phosphate dehydrogenase/oxidase | PHEP_RS02845 | Not Available | Positive | 681684 - 683294 | 58529.1 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS02850 | Not Available | Positive | 683571 - 686837 | 118177.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | PHEP_RS02855 | Not Available | Positive | 686849 - 688417 | 58418.3 |
| duf5689 domain-containing protein | PHEP_RS02860 | Not Available | Positive | 688445 - 690025 | 55904.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
