Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | PHEP_RS02755 | Not Available | Positive | 656382 - 656963 | 21028.7 |
| gfo/idh/moca family protein | PHEP_RS02760 | Not Available | Positive | 656963 - 657979 | 38100.7 |
| hypothetical protein | PHEP_RS02775 | Not Available | Positive | 658648 - 661119 | 92676.4 |
| lanthionine synthetase c family protein | PHEP_RS02780 | Not Available | Positive | 661153 - 662382 | 45798.7 |
| lantibiotic dehydratase family protein | PHEP_RS02785 | Not Available | Positive | 662383 - 664656 | 87441.8 |
| thiopeptide-type bacteriocin biosynthesis protein | PHEP_RS02790 | Not Available | Positive | 664649 - 665602 | 37407.8 |
| peptidase domain-containing abc transporter | PHEP_RS02795 | Not Available | Positive | 665670 - 667847 | 82621.8 |
| hlyd family secretion protein | PHEP_RS02800 | Not Available | Positive | 668034 - 669200 | 44367.2 |
| glycosyltransferase family 2 protein | PHEP_RS02805 | Not Available | Positive | 669200 - 670315 | 43707.6 |
| hypothetical protein | PHEP_RS02810 | Not Available | Positive | 670318 - 671196 | 33584.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
